| Chan DA, Giaccia AJ Targeting cancer cells by synthetic lethality: Autophagy and VHL in cancer therapeutics. 2008 Oct, Cell Cycle, 7(19). [Epub ahead of print] | concepts » synthetic lethality applications » disease association studies » cancer examples » synthetic lethality | |
| Gayan J, Gonzalez-Perez A, Bermudo F, Saez ME, Royo JL, Quintas A, Galan JJ, Moron FJ, Ramirez-Lorca R, Real LM, Ruiz A A method for detecting epistasis in genome-wide studies using case-control multi-locus association analysis. 2008 Jul, BMC Genomics, 9(1):360 | applications » disease association studies | |
| McMurray HR, Sampson ER, Compitello G, Kinsey C, Newman L, Smith B, Chen SR, Klebanov L, Salzman P, Yakovlev A, Land H Synergistic response to oncogenic mutations defines gene class critical to cancer phenotype. 2008 Jun, Nature, 453(7198):1112-1116 | applications » disease association studies » cancer | |
| Pattin KA, Moore JH Exploiting the proteome to improve the genome-wide genetic analysis of epistasis in common human diseases. 2008 Jun, Hum. Genet., [Epub ahead of print] | applications » disease association studies | |
| Hayden EC Biological tools revamp disease classification. 2008 Jun, Nature, 453(7196):709 | applications » disease association studies | |
| Gale GD, Yazdi RD, Khan AH, Lusis AJ, Davis RC, Smith DJ A genome-wide panel of congenic mice reveals widespread epistasis of behavior quantitative trait loci. 2008 Apr, Mol. Psychiatry, [Epub ahead of print] | applications » disease association studies | Mus musculus |
| Mechanic LE, Luke BT, Goodman JE, Chanock SJ, Harris CC Polymorphism Interaction Analysis (PIA): a method for investigating complex gene-gene interactions. 2008 Mar, BMC Bioinformatics, 9(1):146 | applications » disease association studies | |
| Assimes TL, Olshen AB, Narasimhan B, Olshen RA Associations among multiple markers and complex disease: models, algorithms, and applications. 2008 Mar, Adv. Genet., 60:437-464 | applications » disease association studies | |
| Hallgrimsdottir IB, Yuster DS A complete classification of epistatic two-locus models. 2008 Feb, BMC Genet., 9(1):17 | concepts » epistasis concepts applications » population genetics & evolution applications » disease association studies | |
| Bochdanovits Z, Sondervan D, Perillous S, van Beijsterveldt T, Boomsma D, Heutink P Genome-wide prediction of functional gene-gene interactions inferred from patterns of genetic differentiation in mice and men. 2008 Feb, PLoS ONE, 3(2):e1593 | applications » disease association studies | Homo sapiens, Mus musculus |
| Motsinger-Reif AA, Dudek SM, Hahn LW, Ritchie MD Comparison of approaches for machine-learning optimization of neural networks for detecting gene-gene interactions in genetic epidemiology. 2008 Feb, Genet. Epidemiol., [Epub ahead of print] | applications » disease association studies | |
| Kooperberg C., Leblanc M. Increasing the power of identifying gene x gene interactions in genome-wide association studies. 2008 Jan, Genet. Epidemiol., [Epub ahead of print] | applications » disease association studies | |
| Maxwell C. A., Moreno V., Sole X., Gomez L., Hernandez P., Urruticoechea A., Pujana M. A. Genetic interactions: the missing links for a better understanding of cancer susceptibility, progression and treatment. 2008 Jan, Mol. Cancer, 7(1):4 | applications » disease association studies » cancer | |
| Nunkesser R., Bernholt T., Schwender H., Ickstadt K., Wegener I. Detecting high-order interactions of single nucleotide polymorphisms using genetic programming. 2007 Dec, Bioinformatics, 23(24):3280-3288 | applications » disease association studies | |
| Li W. Three lectures on case-control genetic association analysis. 2007 Dec, Brief. Bioinformatics, 9(1):1-13 | applications » disease association studies | |
| Chen X, Liu CT, Zhang M, Zhang H A forest-based approach to identifying gene and gene gene interactions. 2007 Nov, Proc. Natl. Acad. Sci. U.S.A., 104(49):19199-19203 | applications » disease association studies | |
| Chapman J., Clayton D. Detecting association using epistatic information. 2007 Jul, Genet. Epidemiol., | applications » disease association studies | |
| Estrada-Gil J. K., Fernandez-Lopez J. C., Hernandez-Lemus E., Silva-Zolezzi I., Hidalgo-Miranda A., Jimenez-Sanchez G., Vallejo-Clemente E. E. GPDTI: a Genetic Programming Decision Tree Induction method to find epistatic effects in common complex diseases. 2007 Jul, Bioinformatics, 23(13):i167-i174 | discovery » techniques » computational prediction applications » disease association studies | |
| Su X., Hayton K., Wellems T. E. Genetic linkage and association analyses for trait mapping in Plasmodium falciparum. 2007 Jul, Nat. Rev. Genet., 8:497-506 | applications » disease association studies » drug response | Plasmodium falciparum |
| The Wellcome Trust Case Control Consortium Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls. 2007 Jun, Nat. Genet., 447:661-678 | applications » disease association studies | Homo sapiens |
| Sepulveda N., Paulino C. D., Carneiro J., Penha-Goncalves C. Allelic penetrance approach as a tool to model two-locus interaction in complex binary traits. 2007 Jun, Heredity, 99(2):173-184 | applications » disease association studies | |
| Pickrell J., Clerget-Darpoux F., Bourgain C. Power of genome-wide association studies in the presence of interacting loci. 2007 May, Genet. Epidemiol., [Epub ahead of print] | applications » disease association studies | Homo sapiens |
| Yi N., Banerjee S., Pomp D., Yandell B. Bayesian mapping of genome-wide interacting QTL for ordinal traits. 2007 May, Genetics, [Epub ahead of print] | applications » disease association studies | Mus musculus |
| Park M. Y., Hastie T. Penalized logistic regression for detecting gene interactions. 2007 Apr, Biostatistics, 9(1):30-50 | interpretation & analysis applications » disease association studies | Homo sapiens |
| Lin M., Li H., Hou W., Johnson J. A., Wu R. Modelling sequence-sequence interactions for drug response. 2007 Mar, Bioinformatics, 23(10):1251-1257 | discovery applications » disease association studies » drug response multiple perturbationsareas » chemical-genetic interactions » adverse drug response | Homo sapiens |
| Bourgain C., Genin E., Cox N., Clerget-Darpoux F. Are genome-wide association studies all that we need to dissect the genetic component of complex human diseases? 2007 Mar, Eur. J. Hum. Genet., 15:260-263 | applications » disease association studies | |
| Anastassiou, D. Computational analysis of the synergy among multiple interacting genes. 2007 Feb, Mol. Syst. Biol., 3:83 | information theoryconcepts » synergy applications » disease association studies | |
| Lin E., Hwang Y., Liang K. H., Chen E. Y. Pattern-recognition techniques with haplotype analysis in pharmacogenomics. 2007 Jan, Pharmacogenomics, 8(1):75-83 | applications » disease association studies | |
| Zhao J., Jin L., Xiong M. Test for interaction between two unlinked loci. 2006 Sep, Am. J. Hum. Genet., 79(5):831-845 | applications » disease association studies | |
| Onay V. U., Briollais L., Knight J. A., Shi E., Wang Y., Wells S., Li H., Rajendram I., Andrulis I. L., Ozcelik H. SNP-SNP interactions in breast cancer susceptibility. 2006 May, BMC Cancer, 6:114 | applications » disease association studies » cancer | Homo sapiens |
| Marchini J., Donnelly P., Cardon L. R. Genome-wide strategies for detecting multiple loci that influence complex diseases. 2005 Mar, Nat. Genet., 37(4):413-417 | concepts applications » disease association studies | |
| Wang W. Y., Barratt B. J., Clayton D. G., Todd J. A. Genome-wide association studies: theoretical and practical concerns. 2005 Feb, Nat. Rev. Genet., 6(2):109-118 | applications » disease association studies | |
| Kaelin W. G. Jr. The concept of synthetic lethality in the context of anticancer therapy. 2005 Jan, Nat. Rev. Cancer, 5(9):689-698 | concepts » synthetic lethality applications » disease association studies | |
| Carlborg O., Haley C. S. Epistasis: too often neglected in complex trait studies? 2004 Aug, Nat. Rev. Genet., 5:618-625 | applications » disease association studies | |
| Hartwell L. H. Yeast and cancer. 2004 Aug, Biosci. Rep., 24(4-5):523-544 | interpretation & analysis applications » disease association studies » cancer | Saccharomyces cerevisiae, Homo sapiens |
| Moore J. H., Ritchie M. D. The challenges of whole-genome approaches to common diseases. 2004 Apr, JAMA, 291(13):1642-1643 | applications » disease association studies | |
| Moore JH Analysis of gene-gene interactions. 2004 Feb, Curr. Protoc. Hum. Genet., Chapter 1:Unit1.14 | applications » disease association studies | |
| Fraser A. Towards full employment: using RNAi to find roles for the redundant. 2004 Jan, Oncogene, 23:8346-8352 | discovery » techniques » RNAi applications » disease association studies » cancer | Caenorhabditis elegans |
| Moore J. H., Hahn L. W., Ritchie M. D., Thornton T. A., White B. C. Routine discovery of complex genetic models using genetic algorithms. 2004 Jan, Appl. Soft Comput., 4:79-86 | concepts applications » disease association studies | |
| Hoh J, Ott J Mathematical multi-locus approaches to localizing complex human trait genes. 2003 Sep, Nat. Rev. Genet., 4(9):701-709 | discovery » techniques applications » disease association studies | |
| Farrall M. Reports of the Death of the Epistasis Model Are Greatly Exaggerated. 2003 Jan, Am. J. Hum. Genet., 73(6):1467-1468 | applications » disease association studies | |
| Kamb A. Mutation load, functional overlap, and synthetic lethality in the evolution and treatment of cancer. 2003 Jan, J. Theor. Biol., 223(2):205-213 | applications » disease association studies » cancer | |
| Moore J. H. The ubiquitous nature of epistasis in determining susceptibility to common human diseases. 2003 Jan, Hum. Hered., 56(1-3):73-82 | applications » disease association studies | Homo sapiens |
| Vieland V. J., Huang J. Two-Locus Heterogeneity Cannot Be Distinguished from Two-Locus Epistasis on the Basis of Affected-Sib-Pair Data. 2003 Jan, Am. J. Hum. Genet., 73(2):223-232 | applications » disease association studies | |
| Badano J. L., Katsanis N. Beyond Mendel: an evolving view of human genetic disease transmission. 2002 Jan, Nat. Rev. Genet., 3:779-789 | applications » disease association studies | Homo sapiens |
| Cordell H. J. Epistasis: what it means, what it doesn't mean, and statistical methods to detect it in humans. 2002 Jan, Hum. Mol. Genet., 11(20):2463:2468 | applications » disease association studies | Homo sapiens |
| Cardon L. R., Bell J. I. Association study designs for complex diseases. 2001 Feb, Nat. Rev. Genet., 2(2):91-99 | applications » disease association studies | |
| Sham P. Shifting paradigms in gene-mapping methodology for complex traits. 2001 Jan, Pharmacogenomics, 2(3):195-202 | applications » disease association studies | |
| Li W., Reich J. A complete enumeration and classification of two-locus disease models. 2000 Nov, Hum. Hered., 50(6):334-349 | concepts applications » disease association studies | |
| Cheverud J. M., Routman E. J. Epistasis and its contribution to genetic variance components. 1995 Mar, Genetics, 139:1455-1461 | applications » disease association studies | |
| Fearon E. R., Vogelstein B. A. A genetic model for colorectal tumorigenesis. 1990 Jan, Cell, 61:759-767 | applications » disease association studies » cancer | Homo sapiens |