Who is working on genetic interactions?

Brenda Andrews
Department of Medical Genetics & Microbiology, Faculty of Medicine, University of Toronto
Banting and Best Department of Medical Research (BBDMR), Faculty of Medicine, University of Toronto
Terrence Donnelly Centre for Cellular and Biomolecular Research, University of Toronto

www.utoronto.ca/andrewslab/
Saccharomyces cerevisiaegenetic interactions / discovery / techniques / SGA
genetic interactions / discovery / techniques / SDL
Anders Blomberg
Goteborg University
genetic interactions
Jef D. Boeke
The John Hopkins University School of Medicine, The John Hopkins University
www.bs.jhmi.edu/MBG/boekelab/
genetic interactions / discovery / techniques / SLAM
genetic interactions / discovery / techniques / dSLAM
Charlie Boone
Department of Medical Genetics & Microbiology, Faculty of Medicine, University of Toronto
Banting and Best Department of Medical Research (BBDMR), Faculty of Medicine, University of Toronto
Terrence Donnelly Centre for Cellular and Biomolecular Research, University of Toronto

www.utoronto.ca/boonelab/
Development of the synthetic genetic array (SGA) technique.
Saccharomyces cerevisiaegenetic interactions / discovery / techniques / SGA
Howard Bussey
Department of Biology, McGill University
biology.mcgill.ca/faculty/bussey/
Saccharomyces cerevisiaegenetic interactions
Andrew Fraser
www.sanger.ac.uk/Teams/Team37/
Construction of the first systematic genetic interaction map for any animal. Prediction of genetic interactions through data integration. Automated quantitative analysis of RNAi phenotypes.
Caenorhabditis elegansgenetic interactions / discovery / techniques / RNAi
John L. Hartman
Department of Genetics, The University of Alabama at Birmingham
openwetware.org/wiki/Hartman_Lab
Discover how the arrangement of gene circuitry provides robustness, i. e. phenotypic stability over perturbing genetic and environmental inputs. Use cell proliferation as phenotypic readout to quantify the interaction between the perturbation and a deletion at each yeast locus. Vary the type and intensity of perturbation to determine selectivity and strength of interaction and reveal the relative buffering specificity of each gene.
Saccharomyces cerevisiaegenetic interactions
Trey G. Ideker
Department of Bioengineering, University of California, San Diego
chianti.ucsd.edu/idekerlab/
genetic interactions / interpretation & analysis
Nevan J. Krogan
Department of Cellular and Molecular Pharmacology, University of California, San Francisco
kroganlab.ucsf.edu
Saccharomyces cerevisiae, Schizosaccharomyces pombegenetic interactions / discovery / techniques / SGA / E-MAP
genetic interactions / discovery / techniques / pombe epistasis mapper (PEM)
Chad Myers
Department of Computer Science and Engineering, University of Minnesota
www-users.cs.umn.edu/~cmyers/
genetic interactions / interpretation & analysis
Balázs Papp
Biological Research Center
http://www.brc.hu/sysbiol/
Saccharomyces cerevisiaegenetic interactions
Fritz Roth
llama.med.harvard.edu
genetic interactions / interpretation & analysis
Eytan Ruppin
www.cns.tau.ac.il
Interested in constructing a causal interpretation of biological data via a multi-perturbation (knockout) approach; applies the multi-perturbation Shapley value analysis (MSA) and the functional influence network (FIN) approaches to gene knockouts.
genetic interactions / interpretation & analysis
Grace S. Shieh
Institute of Statistical Science, Academia Sinica
http://www.stat.sinica.edu.tw/~gshieh/
genetic interactions / discovery / techniques / computational prediction
Michael Wade
Department of Biology, Indiana University
www.bio.indiana.edu/facultyresearch/faculty/Wade.html
genetic interactions / applications / population genetics & evolution
Jonathan Weissman
Department of Cellular and Molecular Pharmacology, University of California, San Francisco
weissmanlab.ucsf.edu
genetic interactions / discovery / techniques / SGA / E-MAP
genetic interactions / discovery / techniques / SGA / computational colony size measurement
genetic interactions / interpretation & analysis
 

© 2007—2008 Anastasia Baryshnikova (a.baryshnikova@utoronto.ca), graduate student with Charlie Boone and Gary Bader at the University of Toronto.